EM Model Challenge - 2015/2016
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model info
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Global Accuracy
Local Accuracy
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Target:
Tobacco Mosaic Virus: T0001_1ei7_A
T20S Proteasome: T0002_1yar_alpha_A
T20S Proteasome: T0002_1yar_beta_H
GroEL: T0003_1ss8_A
GroEL: T0003_1svt_A
GroEL: T0003_1svt_H
TRPV1 Channel: T0004_3j5p_A
Brome Mosaic Virus: T0005_1js9_A
β-Galactosidase: T0006_1jz7_A
γ-Secretase: T0007_5a63_A
Filter by method type:
ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0002EM120_1_A
1.065
0.00
2.69
0.00
96.40
-514.64
0.908
0.847
0.717
0.886
0.829
0.749
97.511
91.8575
98.603
0.972
0.985
2
T0002EM123_1_A
1.637
3.49
1.08
2.25
92.34
-510.87
0.849
-
0.713
0.882
0.812
0.842
97.511
89.3675
98.732
0.970
0.983
3
T0002EM130_2_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
6.299
-
0.060
4
T0002EM130_4_B
-
-
-
-
-
-
-
-
-
-
-
-
-
-
6.65
-
0.054
5
T0002EM131_1_B
2.027
11.92
0.54
0.00
93.24
-483.28
0.831
0.781
0.719
0.850
0.798
0.797
98.077
90.385
98.869
0.972
0.985
6
T0002EM133_2_B
1.647
2.78
1.05
0.00
89.43
-484.66
0.868
0.814
0.694
0.847
0.778
0.682
97.624
86.9925
99.085
0.952
0.986
7
T0002EM181_2_a
-
34.48
-
-
-
-
-
-
-
-
-
-
-
-
13.849
-
0.322
8
T0002EM183_1_A
2.463
10.78
0.54
18.92
60.36
-359.44
0.274
0.391
0.524
0.343
0.404
5.883
41.629
22.7375
83.728
0.587
0.870
9
T0002EM183_2_A
2.477
10.21
1.08
18.02
58.56
-353.33
0.307
-
0.578
0.364
0.411
5.209
47.285
27.49
83.863
0.645
0.869
10
T0002EM183_3_A
2.366
8.51
0.00
16.22
61.26
-351.48
0.295
-
0.582
0.367
0.419
5.242
48.643
29.0725
84.064
0.653
0.870
11
T0002EM183_4_A
2.443
10.49
0.00
20.27
61.71
-353.82
0.300
-
0.531
0.342
0.402
5.731
41.968
22.17
83.671
0.594
0.871
12
T0002EM183_5_A
2.482
10.49
1.08
18.02
59.46
-358.89
0.315
-
0.589
0.456
0.458
3.641
58.937
37.6675
84.528
0.740
0.880
13
T0002EM183_6_A
2.487
11.91
0.00
17.12
62.61
-350.75
0.255
-
0.578
0.364
0.408
5.276
47.851
28.28
83.625
0.644
0.868
14
T0002EM183_7_A
2.479
7.94
1.61
14.86
63.96
-368.53
0.359
-
0.496
0.395
0.442
5.748
49.774
30.6525
82.786
0.645
0.863
15
T0002EM183_8_A
2.379
9.65
0.00
14.41
66.22
-365.29
0.318
-
0.581
0.402
0.437
4.726
51.697
31.9
84.336
0.680
0.877
16
T0002EM183_9_A
2.298
7.66
0.00
18.02
65.32
-355.13
0.299
-
0.591
0.404
0.439
4.762
53.281
34.05
85.624
0.684
0.881
17
T0002EM183_10_A
2.347
8.22
0.00
14.86
62.16
-337.55
0.268
-
0.566
0.362
0.400
5.073
46.493
26.0175
83.708
0.647
0.865
18
T0002EM189_1_A
3.408
44.63
10.87
0.91
91.78
-461.21
0.765
0.756
0.707
0.804
0.740
1.08
93.778
78.2825
97.337
0.969
0.969
19
T0002EM192_1_A
1.239
1.13
0.00
0.00
93.69
-481.19
0.852
0.813
0.718
0.862
0.806
0.74
97.851
90.6125
98.932
0.972
0.985
20
T0002EM123_2_A
1.4
1.74
1.61
0.45
95.50
-508.76
0.881
-
0.717
0.899
0.838
0.791
97.851
93.1025
98.805
0.972
0.985
21
T0002EM130_1_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
29.759
-
0.297
22
T0002EM130_3_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
9.05
-
0.090
23
T0002EM133_1_B
1.475
1.94
1.05
0.44
91.63
-486.32
0.894
0.825
0.694
0.850
0.792
0.672
98.19
87.1075
99.303
0.952
0.986
24
T0002EM164_1_A
1.907
0.85
5.91
0.90
89.64
-480.55
0.889
-
0.717
0.845
0.804
0.801
97.851
90.84
98.837
0.971
0.984
25
T0002EM189_2_A
3.251
48.66
8.70
0.91
94.52
-461.60
0.763
0.749
0.708
0.810
0.747
1.046
94.344
80.205
97.499
0.971
0.971
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