Model Description - EMDB

EM Model Challenge - 2015/2016

model info help

No.	ID	map A or B	Challenge Target	emcm###_target	Modelling Category	Did you modify provided map?	low pass filter	high pass filter	segmentation	applied a mask	Sharpening factor applied	Source coordinates: PDB id(s)	Effort type	Estimated human effort person-hrs	Estimated computing time cpu-hrs	Refinement space	Which target criteria were used to identify model improvements?	Was the map voxel size adjusted?	Final scale	internal model consistency checked?	fit of model to the target map checked?	fit of model to map other than target (cross-validation)
1	T0002EM120_1	Map A	Proteasome	emcm116_Proteasome	Optimized current	no						3j9i	manual	2	4	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
2	T0002EM123_1	Map A	Proteasome	emcm131_Proteasome	Optimized current	yes	yes	no	no	no	-100	3j9i	fully automated	1	100	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.214	yes	yes	yes
3	T0002EM130_2	Map A	Proteasome	emcm151_Proteasome	ab-initio	yes	no	no	yes	no	-17		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
4	T0002EM130_4	Map A	Proteasome	emcm163_Proteasome	ab-initio	yes	no	no	yes	no	-2		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
5	T0002EM131_1	Map A	Proteasome	emcm171_Proteasome	Optimized current	no						3j9i	partially automated, some manual steps	30	20	real	map vs. model correlation coefficient	no		no	yes	no
6	T0002EM133_2	Map A	Proteasome	emcm172_Proteasome	Fitted another	yes	no	no	no	no	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	yes
7	T0002EM181_1	Map A	Proteasome	emcm142_Proteasome	ab-initio	yes	no	no	no	yes	0		fully automated	1	100	real	map vs. model correlation coefficient	no		yes	yes	no
8	T0002EM181_2	Map A	Proteasome	emcm147_Proteasome	ab-initio	yes	no	no	no	yes	0		fully automated	1	1	real	map vs. model correlation coefficient	no		no	yes	no
9	T0002EM183_1‑10	Map A	Proteasome	emcm111_Proteasome	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient	no		no	yes	no
10	T0002EM189_1	Map A	Proteasome	emcm186_Proteasome	Fitted another	no						1pma	partially automated, some manual steps	24	10	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
11	T0002EM192_1	Map A	Proteasome	emcm178_Proteasome	Optimized current	no						3j9i	partially automated, some manual steps	1	5	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
12	T0002EM123_2	Map B	Proteasome	emcm135_Proteasome	Optimized current	yes	yes	no	no	no	-100	3j9i	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	0.982	yes	yes	yes
13	T0002EM123_3	Map B	Proteasome	emcm175_Proteasome	ab-initio	yes	yes	no	yes	yes	-50		fully automated	1	200	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
14	T0002EM130_1	Map B	Proteasome	emcm109_Proteasome	ab-initio	yes	no	no	yes	no	-20		fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
15	T0002EM130_3	Map B	Proteasome	emcm154_Proteasome	ab-initio	yes	no	no	yes	no	100		fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
16	T0002EM133_1	Map B	Proteasome	emcm170_Proteasome	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient,cross-validation procedure	no		yes	yes	no
17	T0002EM164_1	Map B	Proteasome	emcm203_Proteasome	Optimized current	no						3j9i	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
18	T0002EM189_2	Map B	Proteasome	emcm189_Proteasome	Fitted another	no						1pma	fully automated	24	10	real	map vs. model correlation coefficient,energy function	no		yes	yes	no

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