Model Description

EM Model Challenge - 2015/2016

Results

Multimers

Monomers

Domains

model info help

No.	ID	map A or B	Challenge Target	emcm###_target	Modelling Category	Did you modify provided map?	low pass filter	high pass filter	segmentation	applied a mask	Sharpening factor applied	Source coordinates: PDB id(s)	Effort type	Estimated human effort person-hrs	Estimated computing time cpu-hrs	Refinement space	Which target criteria were used to identify model improvements?	Was the map voxel size adjusted?	Final scale	internal model consistency checked?	fit of model to the target map checked?	fit of model to map other than target (cross-validation)
1	T0001EM119_1	Map A	TMV	emcm129_TMV	Optimized current	no						4udv	partially automated, some manual steps	2	1	real	map vs. model correlation coefficient,other	no		yes	yes
2	T0001EM123_1	Map A	TMV	emcm130_TMV	Optimized current	yes	yes	no	no	no	-100	4udv	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.06	yes	yes	yes
3	T0001EM123_2	Map A	TMV	emcm176_TMV	ab-initio	yes	no	no	no	yes	0		fully automated	1	200	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
4	T0001EM130_1	Map A	TMV	emcm133_TMV	ab-initio	yes	no	no	yes	no	-21		fully automated	0	7	real	map vs. model correlation coefficient	no		yes	yes	no
5	T0001EM130_2	Map A	TMV	emcm156_TMV	ab-initio	yes	no	no	yes	no	125		fully automated	0	7	real	map vs. model correlation coefficient	no		yes	yes	no
6	T0001EM133_1	Map A	TMV	emcm173_TMV	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	2	10	real	map vs. model correlation coefficient	no		yes	yes	no
7	T0001EM164_1	Map A	TMV	emcm200_TMV	Optimized current	no						4udv	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
8	T0001EM181_1	Map A	TMV	emcm143_TMV	ab-initio	yes	no	no	no	yes	0		fully automated	1	100	real	map vs. model correlation coefficient	no		yes	yes	no
9	T0001EM181_2	Map A	TMV	emcm146_TMV	ab-initio	yes	no	no	no	yes	0		fully automated	1	1	real	map vs. model correlation coefficient	no		no	yes	no
10	T0001EM192_1	Map A	TMV	emcm174_TMV	Optimized current	no						4udv	partially automated, some manual steps	1	5	real	map vs. model correlation coefficient,cross-validation procedure	no		yes	yes	no
11	T0001EM194_1	Map A	TMV	emcm197_TMV	ab-initio	yes	yes	no	yes	yes	0		fully automated	1	1	real	other	no		no	yes	no
12	T0002EM120_1	Map A	Proteasome	emcm116_Proteasome	Optimized current	no						3j9i	manual	2	4	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
13	T0002EM123_1	Map A	Proteasome	emcm131_Proteasome	Optimized current	yes	yes	no	no	no	-100	3j9i	fully automated	1	100	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.214	yes	yes	yes
14	T0002EM130_2	Map A	Proteasome	emcm151_Proteasome	ab-initio	yes	no	no	yes	no	-17		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
15	T0002EM130_4	Map A	Proteasome	emcm163_Proteasome	ab-initio	yes	no	no	yes	no	-2		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
16	T0002EM131_1	Map A	Proteasome	emcm171_Proteasome	Optimized current	no						3j9i	partially automated, some manual steps	30	20	real	map vs. model correlation coefficient	no		no	yes	no
17	T0002EM133_2	Map A	Proteasome	emcm172_Proteasome	Fitted another	yes	no	no	no	no	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	yes
18	T0002EM181_1	Map A	Proteasome	emcm142_Proteasome	ab-initio	yes	no	no	no	yes	0		fully automated	1	100	real	map vs. model correlation coefficient	no		yes	yes	no
19	T0002EM181_2	Map A	Proteasome	emcm147_Proteasome	ab-initio	yes	no	no	no	yes	0		fully automated	1	1	real	map vs. model correlation coefficient	no		no	yes	no
20	T0002EM183_1‑10	Map A	Proteasome	emcm111_Proteasome	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient	no		no	yes	no
21	T0002EM189_1	Map A	Proteasome	emcm186_Proteasome	Fitted another	no						1pma	partially automated, some manual steps	24	10	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
22	T0002EM192_1	Map A	Proteasome	emcm178_Proteasome	Optimized current	no						3j9i	partially automated, some manual steps	1	5	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
23	T0002EM123_2	Map B	Proteasome	emcm135_Proteasome	Optimized current	yes	yes	no	no	no	-100	3j9i	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	0.982	yes	yes	yes
24	T0002EM123_3	Map B	Proteasome	emcm175_Proteasome	ab-initio	yes	yes	no	yes	yes	-50		fully automated	1	200	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
25	T0002EM130_1	Map B	Proteasome	emcm109_Proteasome	ab-initio	yes	no	no	yes	no	-20		fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
26	T0002EM130_3	Map B	Proteasome	emcm154_Proteasome	ab-initio	yes	no	no	yes	no	100		fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
27	T0002EM133_1	Map B	Proteasome	emcm170_Proteasome	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient,cross-validation procedure	no		yes	yes	no
28	T0002EM164_1	Map B	Proteasome	emcm203_Proteasome	Optimized current	no						3j9i	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
29	T0002EM189_2	Map B	Proteasome	emcm189_Proteasome	Fitted another	no						1pma	fully automated	24	10	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
30	T0003EM119_1	Map A	GroEL	emcm119_GroEL	Fitted another	no						1grl	partially automated, some manual steps	10	10	real	map vs. model correlation coefficient,other	no		yes	yes	yes
31	T0003EM123_1	Map A	GroEL	emcm137_GroEL	Optimized current	yes	yes	no	no	no	-100	3zpz	fully automated	1	100	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.07	yes	yes	yes
32	T0003EM130_1	Map A	GroEL	emcm127_GroEL	ab-initio	yes	no	no	yes	no	64		fully automated	0	153	real	map vs. model correlation coefficient	no		yes	yes	no
33	T0003EM130_2	Map A	GroEL	emcm155_GroEL	ab-initio	yes	no	no	yes	no	203		fully automated	0	153	real	map vs. model correlation coefficient	no		yes	yes	no
34	T0003EM133_1	Map A	GroEL	emcm167_GroEL	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	2	10	real	map vs. model correlation coefficient	no		yes	yes	no
35	T0003EM164_1	Map A	GroEL	emcm110_GroEL	Optimized current	no						2c7c:H	fully automated	1	5	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
36	T0003EM164_2	Map A	GroEL	emcm204_GroEL	Optimized current	no						2c7c:H	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
37	T0003EM192_1	Map A	GroEL	emcm182_GroEL	Fitted another	no						1ss8	partially automated, some manual steps	1	2	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
38	T0004EM119_1	Map A	TRPVI	emcm120_TRPVI	Optimized current	yes	no	no	no	no	0	3j5p	partially automated, some manual steps	10	10	real	map vs. model correlation coefficient,other	no		yes	yes	yes
39	T0004EM120_1	Map A	TRPVI	emcm115_TRPVI	Optimized current	no						3j5p	manual	5	10	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
40	T0004EM123_1	Map A	TRPVI	emcm132_TRPVI	Optimized current	yes	yes	no	no	no	-100	3j5p	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	no		yes	yes	yes
41	T0004EM130_1	Map A	TRPVI	emcm139_TRPVI	ab-initio	yes	no	no	yes	no	9		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
42	T0004EM130_2	Map A	TRPVI	emcm160_TRPVI	ab-initio	yes	no	no	yes	no	197		fully automated	0	14	real	map vs. model correlation coefficient	no		yes	yes	no
43	T0004EM131_1	Map A	TRPVI	emcm164_TRPVI	Optimized current	no						3j5p	partially automated, some manual steps	75	60	real	map vs. model correlation coefficient	no		no	yes	no
44	T0004EM133_1	Map A	TRPVI	emcm179_TRPVI	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	2	10	real	map vs. model correlation coefficient	no		yes	yes	no
45	T0004EM164_1	Map A	TRPVI	emcm103_TRPVI	Optimized current	no						3j5p	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
46	T0004EM164_2	Map A	TRPVI	emcm104_TRPVI	Optimized current	no						3j9j	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
47	T0004EM183_1‑10	Map A	TRPVI	emcm108_TRPVI	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient,energy function	no		no	yes	no
48	T0004EM192_1	Map A	TRPVI	emcm187_TRPVI	Optimized current	no						3j5p	partially automated, some manual steps	1	2	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
49	T0004EM193_1	Map A	TRPVI	emcm123_TRPVI	Optimized current	no						3j5p	fully automated	8	2	real	map vs. model correlation coefficient,map vs. model FSC curve,cross-validation procedure	no		yes	yes	yes
50	T0004EM194_1	Map A	TRPVI	emcm198_TRPVI	ab-initio	yes	yes	no	yes	yes	0		fully automated	1	1	real	other	no		no	no	no
51	T0005EM119_1	Map A	BMV	emcm180_BMV	Optimized current	no						3j7l	partially automated, some manual steps	2	2	real	map vs. model correlation coefficient,other	no		yes	yes
52	T0005EM123_1	Map A	BMV	emcm177_BMV	ab-initio	yes	no	no	yes	yes	0		fully automated	1	300	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
53	T0005EM123_2	Map A	BMV	emcm185_BMV	Optimized current	yes	yes	no	yes	yes	-50	3j7l	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	0.99	yes	yes	yes
54	T0005EM130_1	Map A	BMV	emcm134_BMV	ab-initio	no							fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
55	T0005EM130_2	Map A	BMV	emcm157_BMV	ab-initio	yes	no	no	yes	no	-28		fully automated	0	16	real	map vs. model correlation coefficient	no		yes	yes	no
56	T0005EM133_1	Map A	BMV	emcm194_BMV	Optimized current	yes	no	no	yes	yes	0	3j7l	partially automated, some manual steps	1	1	real	map vs. model correlation coefficient	no		yes	yes	no
57	T0005EM164_1	Map A	BMV	emcm208_BMV	Optimized current	no						3j7l	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
58	T0005EM181_1	Map A	BMV	emcm107_BMV	ab-initio	yes			no	yes	0		fully automated	1	85	real	map vs. model correlation coefficient	no		yes	yes	no
59	T0005EM181_2	Map A	BMV	emcm145_BMV	ab-initio	yes	no	no	no	yes	0		fully automated	1	1	real	map vs. model correlation coefficient	no		no	yes	no
60	T0005EM183_1‑10	Map A	BMV	emcm113_BMV	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient,energy function	no		no	yes	no
61	T0005EM192_1	Map A	BMV	emcm192_BMV	Optimized current	no						3j7l	partially automated, some manual steps	1	5	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
62	T0005EM194_1	Map A	BMV	emcm191_BMV	ab-initio	yes	yes	no	yes	yes	0		fully automated	1	1	real	other	no		no	yes	no
63	T0006EM119_1	Map A	BGal	emcm124_BGal	Optimized current	no						3j7h	partially automated, some manual steps	5	5	real	map vs. model correlation coefficient,other	no		yes	yes
64	T0006EM123_2	Map A	BGal	emcm183_BGal	Optimized current	no						3j7h	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	0.6375	yes	yes	yes
65	T0006EM128_1	Map A	BGal	emcm118_BGal	Fitted another	no						4ttg	partially automated, some manual steps	8	1	real	map vs. model correlation coefficient	no		yes	yes	yes
66	T0006EM130_1	Map A	BGal	emcm149_BGal	ab-initio	yes	no	no	yes	no	-13		fully automated	0	39	real	map vs. model correlation coefficient	no		yes	yes	no
67	T0006EM130_3	Map A	BGal	emcm161_BGal	ab-initio	yes	no	no	yes	no	167		fully automated	0	39	real	map vs. model correlation coefficient	no		yes	yes	no
68	T0006EM133_2	Map A	BGal	emcm166_BGal	Fitted another	no							partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	no
69	T0006EM164_1	Map A	BGal	emcm202_BGal	Optimized current	no						3j7h	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
70	T0006EM192_1	Map A	BGal	emcm193_BGal	Optimized current	no						3j7h	partially automated, some manual steps	1	2	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
71	T0006EM193_1	Map A	BGal	emcm125_BGal	Optimized current	no						3j7h	fully automated	8	8	real	map vs. model correlation coefficient,map vs. model FSC curve,cross-validation procedure	no		yes	yes	yes
72	T0006EM194_1	Map A	BGal	emcm190_BGal	ab-initio	yes	yes	no	yes	yes	0		fully automated	1	1	real	other	no		yes	yes	no
73	T0006EM119_2	Map B	BGal	emcm188_BGal	Optimized current	no						5a1a	partially automated, some manual steps	5	5	reciprocal	map vs. model correlation coefficient,other	no		yes	yes
74	T0006EM123_1	Map B	BGal	emcm181_BGal	Optimized current	no						3j7h	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	0.637	yes	yes	yes
75	T0006EM130_2	Map B	BGal	emcm150_BGal	ab-initio	yes	no	no	yes	no	-9		fully automated	0	32	real	map vs. model correlation coefficient	no		yes	yes	no
76	T0006EM130_4	Map B	BGal	emcm162_BGal	ab-initio	yes	no	no	yes	no	-11		fully automated	0	32	real	map vs. model correlation coefficient	no		yes	yes	no
77	T0006EM133_1	Map B	BGal	emcm165_BGal	Fitted another	yes	no	no	yes	yes	0		partially automated, some manual steps	1	6	real	map vs. model correlation coefficient	no		yes	yes	no
78	T0006EM192_2	Map B	BGal	emcm195_BGal	Optimized current	no						5a1a	partially automated, some manual steps	1	2	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
79	T0007EM118_1	Map A	GSec	emcm106_GSec	Optimized current	no							partially automated, some manual steps	10	150	real	map vs. model correlation coefficient	no		no	yes	no
80	T0007EM119_1	Map A	GSec	emcm121_GSec	Fitted another	no						4upc and 5a63	partially automated, some manual steps	10	10	real	map vs. model correlation coefficient,other	no		yes	yes	yes
81	T0007EM123_1	Map A	GSec	emcm126_GSec	Optimized current	yes	no	yes	no	no	-100	5a63	fully automated	1	100	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function	yes	1.8	yes	yes	yes
82	T0007EM130_1	Map A	GSec	emcm136_GSec	ab-initio	yes	no	no	yes	no	-83		fully automated	0	23	real	map vs. model correlation coefficient	no		yes	yes	no
83	T0007EM130_3	Map A	GSec	emcm158_GSec	ab-initio	yes	no	no	yes	no	-112		fully automated	0	23	real	map vs. model correlation coefficient	no		yes	yes	no
84	T0007EM133_2	Map A	GSec	emcm169_GSec	Fitted another	yes	no	no	yes	no	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	no
85	T0007EM164_1	Map A	GSec	emcm102_GSec	Optimized current	no						4upc	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
86	T0007EM189_1	Map A	GSec	emcm184_GSec	Fitted another	no							partially automated, some manual steps	24	5	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
87	T0007EM192_1	Map A	GSec	emcm199_GSec	Optimized current	no						4upc	partially automated, some manual steps	1	1	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
88	T0007EM119_2	Map B	GSec	emcm122_GSec	Optimized current	no						5a63	partially automated, some manual steps	10	10	real	map vs. model correlation coefficient,other	no		yes	yes	yes
89	T0007EM120_1	Map B	GSec	emcm114_GSec	Optimized current	no						5a63	manual	4	12	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
90	T0007EM123_2	Map B	GSec	emcm128_GSec	Optimized current	yes	yes	no	no	no	-100	5a63	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.4	yes	yes	yes
91	T0007EM130_2	Map B	GSec	emcm138_GSec	ab-initio	yes	no	no	yes	no	-15		fully automated	0	34	real	map vs. model correlation coefficient	no		yes	yes	no
92	T0007EM130_4	Map B	GSec	emcm159_GSec	ab-initio	yes	no	no	yes	no	-15		fully automated	0	34	real	map vs. model correlation coefficient	no		yes	yes	no
93	T0007EM133_1	Map B	GSec	emcm168_GSec	Fitted another	yes	no	no	yes	no	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	no
94	T0007EM164_2	Map B	GSec	emcm105_GSec	Optimized current	no						5a63	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
95	T0007EM181_1	Map B	GSec	emcm144_GSec	ab-initio	yes	no	no	no	yes	0		fully automated	1	395	real	map vs. model correlation coefficient	no		yes	yes	no
96	T0007EM181_2	Map B	GSec	emcm148_GSec	ab-initio	yes	no	no	no	yes	0		fully automated	1	10	real	map vs. model correlation coefficient	no		no	yes	no
97	T0007EM183_1‑10	Map B	GSec	emcm112_GSec	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient,energy function	no		no	yes	no
98	T0007EM185_1	Map B	GSec	emcm206_GSec	ab-initio	no							partially automated, some manual steps	6	40	real	map vs. model correlation coefficient,energy function	no		no	no	no
99	T0007EM192_2	Map B	GSec	emcm201_GSec	Optimized current	no						5a63	partially automated, some manual steps	1	1	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
100	T0007EM194_1	Map B	GSec	emcm196_GSec	ab-initio	yes	yes	no	no	no	0		fully automated	1	1	real	other	no		no	yes	no
101	T0008EM120_1	Map A	Ribosome	emcm117_Ribosome	Optimized current	no						5afi	manual	30	60	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
102	T0008EM130_2	Map A	Ribosome	emcm153_Ribosome	ab-initio	yes	no	no	yes	no	-14		fully automated	0	422	real	map vs. model correlation coefficient	no		yes	yes	no
103	T0008EM131_1	Map A	Ribosome	emcm141_Ribosome	Optimized current	no						5afi	partially automated, some manual steps	50	30	real	map vs. model correlation coefficient	no		no	yes	no
104	T0008EM192_2	Map A	Ribosome	emcm207_Ribosome	Optimized current	no						5afi	partially automated, some manual steps	1	6	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
105	T0008EM130_1	Map B	Ribosome	emcm152_Ribosome	ab-initio	yes	no	no	yes	no	46		fully automated	0	322	real	map vs. model correlation coefficient	no		yes	yes	no
106	T0008EM192_1	Map B	Ribosome	emcm205_Ribosome	Optimized current	no						3ja1	partially automated, some manual steps	1	6	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no