EM Model Challenge - 2015/2016
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Global Accuracy
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Target:
GroEL: T0003_1ss8_A-D1
GroEL: T0003_1ss8_A-D2
GroEL: T0003_1ss8_A-D3
GroEL: T0003_1svt_A-D1
GroEL: T0003_1svt_A-D2
GroEL: T0003_1svt_A-D3
GroEL: T0003_1svt_H-D1
GroEL: T0003_1svt_H-D2
GroEL: T0003_1svt_H-D3
TRPV1 Channel: T0004_3j5p_A-D1
TRPV1 Channel: T0004_3j5p_A-D2
β-Galactosidase: T0006_1jz7_A-D1
β-Galactosidase: T0006_1jz7_A-D2
β-Galactosidase: T0006_1jz7_A-D3
β-Galactosidase: T0006_1jz7_A-D4
β-Galactosidase: T0006_1jz7_A-D5
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ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0003EM119_1_A-D1
2.197
13.98
0.00
0.41
90.16
-465.23
0.585
-
0.911
0.755
0.715
1.623
84.163
62.945
91.796
0.941
0.930
2
T0003EM123_1_A-D1
1.596
4.60
0.53
0.81
94.74
-516.07
0.580
-
0.888
0.770
0.731
1.551
85.359
65.5375
93.122
0.945
0.945
3
T0003EM133_1_A-D1
1.74
2.71
1.59
0.00
90.69
-507.93
0.594
-
0.909
0.748
0.730
1.524
84.064
62.5475
92.885
0.943
0.943
4
T0003EM164_1_A-D1
1.667
0.56
5.32
0.81
93.50
-524.77
0.588
-
0.879
0.786
0.757
1.736
78.785
58.065
89.22
0.924
0.918
5
T0003EM164_2_A-D1
1.667
0.56
5.32
0.81
93.50
-464.00
0.583
-
0.879
0.786
0.757
1.736
78.785
58.065
89.196
0.924
0.918
6
T0003EM192_1_A-D1
1.092
1.09
0.53
0.00
95.95
-505.72
0.663
-
0.917
0.780
0.769
1.444
86.454
64.6425
94.015
0.948
0.948
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