EM Model Challenge - 2015/2016
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Global Accuracy
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Target:
Tobacco Mosaic Virus: T0001_1ei7_A
T20S Proteasome: T0002_1yar_alpha_A
T20S Proteasome: T0002_1yar_beta_H
GroEL: T0003_1ss8_A
GroEL: T0003_1svt_A
GroEL: T0003_1svt_H
TRPV1 Channel: T0004_3j5p_A
Brome Mosaic Virus: T0005_1js9_A
β-Galactosidase: T0006_1jz7_A
γ-Secretase: T0007_5a63_A
Filter by method type:
ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0001EM119_1_A
1.615
5.43
0.00
0.00
95.36
-316.25
0.735
0.725
0.821
0.825
0.769
1.389
90.348
78.0075
92.96
0.947
0.918
2
T0001EM123_1_A
0.649
0.42
0.00
0.00
98.68
-353.71
0.803
0.836
0.817
0.870
0.801
1.316
91.297
82.5975
93.343
0.954
0.925
3
T0001EM123_2_A
0.972
0.42
0.00
1.32
95.36
-359.14
0.771
0.816
0.808
0.873
0.809
1.537
90.506
81.49
92.932
0.943
0.919
4
T0001EM130_1_S
-
-
-
-
-
-
-
-
-
-
-
-
-
-
12.059
-
0.118
5
T0001EM130_2_B
-
-
-
-
-
-
-
-
-
-
-
-
-
-
19.781
-
0.199
6
T0001EM133_1_A
2.229
4.49
4.35
0.00
91.03
-310.31
0.720
0.699
0.780
0.801
0.755
1.765
91.772
74.525
94.684
0.932
0.935
7
T0001EM164_1_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
5.165
-
0.047
8
T0001EM181_1_A
3.101
35.94
2.96
1.32
82.12
-223.84
0.408
0.582
0.641
0.512
0.497
3.244
65.665
44.4625
83.791
0.762
0.838
9
T0001EM181_2_a
-
6.45
-
-
-
23864.85
-
-
0.133
-
-
25.042
12.816
7.2775
23.941
0.152
0.326
10
T0001EM192_1_A
1.562
2.09
0.74
0.00
88.74
-309.33
0.720
-
0.818
0.809
0.755
1.425
90.032
76.9
93.174
0.943
0.914
11
T0001EM194_1_a
1.742
3.35
0.00
2.13
87.23
-286.64
0.679
0.622
0.794
0.716
0.675
1.588
85.127
68.6725
90.628
0.926
0.899
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