EM Model Challenge - 2015/2016
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Global Accuracy
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Target:
GroEL: T0003_1ss8_A-D1
GroEL: T0003_1ss8_A-D2
GroEL: T0003_1ss8_A-D3
GroEL: T0003_1svt_A-D1
GroEL: T0003_1svt_A-D2
GroEL: T0003_1svt_A-D3
GroEL: T0003_1svt_H-D1
GroEL: T0003_1svt_H-D2
GroEL: T0003_1svt_H-D3
TRPV1 Channel: T0004_3j5p_A-D1
TRPV1 Channel: T0004_3j5p_A-D2
β-Galactosidase: T0006_1jz7_A-D1
β-Galactosidase: T0006_1jz7_A-D2
β-Galactosidase: T0006_1jz7_A-D3
β-Galactosidase: T0006_1jz7_A-D4
β-Galactosidase: T0006_1jz7_A-D5
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ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0003EM119_1_A-D1
2.197
13.98
0.00
0.41
90.16
-465.23
0.585
-
0.911
0.793
0.733
1.141
90.438
71.0175
95.492
0.970
0.959
2
T0003EM123_1_A-D1
1.596
4.60
0.53
0.81
94.74
-516.07
0.580
-
0.888
0.787
0.733
1.034
91.633
72.2125
96.993
0.971
0.971
3
T0003EM133_1_A-D1
1.74
2.71
1.59
0.00
90.69
-507.93
0.594
-
0.909
0.772
0.742
0.97
92.032
72.2125
97.206
0.974
0.974
4
T0003EM164_1_A-D1
1.667
0.56
5.32
0.81
93.50
-463.97
0.588
-
0.879
0.824
0.780
1.135
89.143
69.52
95.165
0.965
0.957
5
T0003EM164_2_A-D1
1.667
0.56
5.32
0.81
93.50
-464.00
0.583
-
0.879
0.824
0.780
1.135
89.143
69.52
95.165
0.965
0.957
6
T0003EM192_1_A-D1
1.092
1.09
0.53
0.00
95.95
-505.84
0.663
-
0.917
0.840
0.812
0.851
93.825
74.8
98.085
0.980
0.980
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