EM Model Challenge - 2015/2016
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Global Accuracy
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Target:
GroEL: T0003_1ss8_A-D1
GroEL: T0003_1ss8_A-D2
GroEL: T0003_1ss8_A-D3
GroEL: T0003_1svt_A-D1
GroEL: T0003_1svt_A-D2
GroEL: T0003_1svt_A-D3
GroEL: T0003_1svt_H-D1
GroEL: T0003_1svt_H-D2
GroEL: T0003_1svt_H-D3
TRPV1 Channel: T0004_3j5p_A-D1
TRPV1 Channel: T0004_3j5p_A-D2
β-Galactosidase: T0006_1jz7_A-D1
β-Galactosidase: T0006_1jz7_A-D2
β-Galactosidase: T0006_1jz7_A-D3
β-Galactosidase: T0006_1jz7_A-D4
β-Galactosidase: T0006_1jz7_A-D5
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ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0006EM119_1_A-D1
1.671
7.37
0.00
0.00
96.10
-412.73
0.827
-
0.991
0.868
0.798
0.536
99.275
89.855
99.809
0.990
0.990
2
T0006EM123_2_A-D1
1.152
2.15
0.55
0.00
97.07
-442.78
0.865
-
0.995
0.951
0.883
0.322
100
98.31
100
0.996
0.996
3
T0006EM128_1_A-D1
1.539
6.81
0.00
0.00
97.07
-409.37
0.829
-
0.991
0.889
0.821
0.492
99.396
92.7525
99.847
0.992
0.992
4
T0006EM133_2_A-D1
1.595
4.91
0.55
0.00
95.12
-418.89
0.854
-
0.989
0.875
0.814
0.537
99.155
90.7
99.733
0.990
0.990
5
T0006EM164_1_A-D1
3.214
102.82
9.34
0.00
99.02
-402.84
0.781
-
0.988
0.843
0.786
0.588
98.792
88.285
99.659
0.988
0.988
6
T0006EM192_1_A-D1
1.485
1.23
1.65
0.00
92.20
-420.17
0.829
-
0.992
0.880
0.811
0.557
99.275
90.4575
99.735
0.990
0.989
7
T0006EM193_1_A-D1
Inf
-
4.40
0.98
96.59
-433.29
-
-
0.993
0.901
0.836
0.525
99.396
92.1475
99.773
0.991
0.991
8
T0006EM194_1_a-D1
2.02
5.22
0.00
0.49
79.51
-389.72
0.752
-
0.958
0.740
0.694
0.841
95.411
80.3125
98.273
0.977
0.977
9
T0006EM119_2_A-D1
1.318
3.07
0.00
0.00
96.59
-436.03
0.841
-
0.993
0.945
0.874
0.365
99.758
97.2225
99.962
0.996
0.995
10
T0006EM123_1_A-D1
1.669
2.76
1.65
1.46
93.17
-436.87
0.828
-
0.993
0.951
0.835
0.507
99.396
93.72
99.816
0.992
0.992
11
T0006EM133_1_A-D1
1.628
4.60
0.55
0.00
94.15
-426.12
0.864
-
0.991
0.902
0.833
0.454
99.517
94.325
99.886
0.993
0.993
12
T0006EM192_2_A-D1
1.467
3.38
0.55
0.00
95.12
-433.05
0.845
-
0.993
0.928
0.850
0.415
99.517
96.135
99.886
0.994
0.994
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