EM Model Challenge - 2015/2016
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Global Accuracy
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Target:
Tobacco Mosaic Virus: T0001_1ei7_A
T20S Proteasome: T0002_1yar_alpha_A
T20S Proteasome: T0002_1yar_beta_H
GroEL: T0003_1ss8_A
GroEL: T0003_1svt_A
GroEL: T0003_1svt_H
TRPV1 Channel: T0004_3j5p_A
Brome Mosaic Virus: T0005_1js9_A
β-Galactosidase: T0006_1jz7_A
γ-Secretase: T0007_5a63_A
Filter by method type:
ab-initio
optimized cryoEM model
optimized other known model
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Single-model
validation
Comparison to other
submitted models
Comparison to the reference
structure
Knowledge-based
potentials
Estimates of
model accuracy
Superposition-free measures
(similarity of local
geometric features)
Superposition-based measures
(rigid body similarity)
Molprobity
#
Model
Molprb
Clash
Rot-out
Ram-out
Ram-fv
DFIRE
ProQ
QMEAN
DAVIS_QA
LDDT
CAD
RMSD
GDT_TS
GDT_HA
LGA_S
TMscore
TMalign
1
T0006EM119_1_A
1.683
8.56
0.46
0.00
96.57
-2230.95
0.935
0.803
0.985
0.870
0.792
0.624
98.343
87.3625
99.386
0.986
0.997
2
T0006EM123_2_A
1.074
1.25
1.37
0.20
97.35
-2425.16
0.968
0.858
0.986
0.946
0.873
0.445
99.407
94.3875
99.806
0.988
0.998
3
T0006EM128_1_A
1.493
9.30
0.00
0.00
98.14
-2286.07
0.928
0.813
0.984
0.885
0.813
0.604
98.417
87.71
99.436
0.986
0.997
4
T0006EM130_1_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
7.811
-
0.110
5
T0006EM130_3_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
7.988
-
0.080
6
T0006EM133_2_A
1.657
4.86
0.35
0.00
93.95
-2233.86
0.934
0.815
0.981
0.866
0.795
0.662
97.7
86.425
99.154
0.996
0.996
7
T0006EM164_1_A
3.354
108.26
9.15
0.20
97.35
-2179.52
0.896
0.724
0.979
0.823
0.778
0.65
97.7
86.87
99.152
0.986
0.996
8
T0006EM192_1_A
1.549
3.43
0.80
0.20
93.73
-2271.05
0.936
0.799
0.985
0.871
0.796
0.648
97.898
87.07
99.239
0.986
0.996
9
T0006EM193_1_A
Inf
-
3.89
0.69
95.78
-2344.10
-
0.798
0.984
0.892
0.815
0.634
97.997
88.3025
99.239
0.986
0.996
10
T0006EM194_1_a
2.014
6.01
0.46
0.20
83.46
-2136.85
0.851
0.743
0.945
0.753
0.694
1.054
93.225
77.325
96.755
0.980
0.988
11
T0006EM119_2_A
1.431
4.87
0.34
0.10
96.96
-2356.88
0.950
0.839
0.986
0.940
0.859
0.502
99.085
93.99
99.644
0.987
0.998
12
T0006EM123_1_A
1.358
2.19
0.80
1.18
94.71
-2389.37
0.944
0.858
0.986
0.946
0.839
0.546
98.689
90.405
99.567
0.987
0.997
13
T0006EM130_2_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
53.86
-
0.539
14
T0006EM130_4_A
-
-
-
-
-
-
-
-
-
-
-
-
-
-
50.185
-
0.505
15
T0006EM133_1_A
1.96
7.39
1.04
0.69
90.29
-2229.42
0.923
0.790
0.971
0.870
0.799
0.683
97.305
87.315
98.954
0.996
0.996
16
T0006EM192_2_A
1.429
3.18
0.23
0.10
95.39
-2330.02
0.942
0.819
0.985
0.921
0.840
0.547
98.912
92.2575
99.561
0.987
0.997
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