EM Model Challenge - 2019
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Results
model coordinates only
fit to EM map
vs reference structure
vs other models
Comparative Analyses
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Model Ranks (per target)
Models Pair-wise Comparison
Scores Pair-wise Comparison
Group Ranks (across targets)
Target:
Human Apoferritin: T0101 (emd_20026_1)
Human Apoferritin: T0102 (emd_20027_2)
Human Apoferritin: T0103 (emd_20028_2)
Horse Liver Alcohol Dehydrogenase: T0104 (emd_0406)
Filter by method:
ab-initio
optimized cryoEM model
fully automated
partially automated, with some manual steps
Score Weights:
·
model coordinates only
(MP)clash:
(MP)Ram.out:
(MP)Ram.fv:
(MP)Rot.out:
Cablam(Conf-out):
Cablam(Cα-out):
Angle_RMSD:
·
fit to EM map
CCC:
CCC(ov):
LAP:
ENV(noH):
MI:
SMOC(noH):
box_CC:
CC_mask:
CC_vol:
CC_peaks:
ResFSC05:
box_CC(BF0):
CC_mask(BF0):
CC_vol(BF0):
CC_peaks(BF0):
ResFSC05(BF0):
EMRinger:
Q-score(noH):
AtmIncl(All)(noH):
AtmIncl(BB):
·
vs reference structure (mono), vs other models
GDT_TS:
GDT_HA:
GDC_ALL:
GDC_SC:
LDDT:
CAD:
RMSD(Cα):
DAVIS_QA:
·
vs reference structure (multi)
QS(best):
QS(glob):
LDDT(o):
LDDT(w):
GDT_TS:
GDC_ALL:
GDC_SC:
RMSD(Cα):
(HB)Prec.:
(HB)Jaccard:
(HB)Prec.(>6):
(HB)Jaccard(>6):
#
Model
Group
Name
Method
Combined Z-score
(normalized by
the sum of weights)
Rank
ab-initio/
optimized
auto/
man.
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