EM Model Challenge - 2021
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Results
model coordinates only
fit to EM map
vs reference structure
vs other models
ligands
Comparative Analyses
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Model Ranks (per target)
Models Pair-wise Comparison
Scores Pair-wise Comparison
Group Ranks (across targets)
Scatter Plots
Target:
-- all --
β-Galactosidase: T0201
RNA polymerase: T0202
ORF3a ion channel: T0203
Filter by method:
ab-initio
optimized cryoEM model
optimized other known model
not optimized
ab-initio+optimized (mixed)
Filter by effort:
fully automated
partially automated, with some manual steps
manual
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
x=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
y=
AI_ALL
AI_BB
Box_CC
CaBLAM_CA_OUT
CaBLAM_OUT
CC(mask)
CC(peaks)
CC(vol)
CCC
RNA confal_perc
EMRinger
MM_lig
MOGUL L-COMPOSITE score
MP_CLASH
MP_RAM_FV
MP_RAM_OUT
MP_ROT_OUT
PH4_lig
Q_score
Q_score F86
Q_score PEE
Q_score PTG
Resol.FSC0.5
RNA pucker-out
RNA suite-out
SMOC
HOH clash
HB_Jaccard
HB_Jaccard_6
HB_Prec
HB_Prec_6
(MONO)CAD
(MONO)GDC_ALL
(MONO)GDC_SC
(MONO)GDT_HA
(MONO)GDT_TS
(MONO)LDDT
(MONO)DAVIS_CONS
(MONO)RMSD_CA
(MULTI)LDDT(w)
(MULTI)QS(best)
(MULTI)QS(glob)
(MULTI)LDDT(o)
(MULTI)QS_RMSD_CA
(MULTI)TM_score
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