Model Description - EMDB

EM Model Challenge - 2015/2016

model info help

No.	ID	map A or B	Challenge Target	emcm###_target	Modelling Category	Did you modify provided map?	low pass filter	high pass filter	segmentation	applied a mask	Sharpening factor applied	Source coordinates: PDB id(s)	Effort type	Estimated human effort person-hrs	Estimated computing time cpu-hrs	Refinement space	Which target criteria were used to identify model improvements?	Was the map voxel size adjusted?	Final scale	internal model consistency checked?	fit of model to the target map checked?	fit of model to map other than target (cross-validation)
1	T0007EM119_2	Map B	GSec	emcm122_GSec	Optimized current	no						5a63	partially automated, some manual steps	10	10	real	map vs. model correlation coefficient,other	no		yes	yes	yes
2	T0007EM120_1	Map B	GSec	emcm114_GSec	Optimized current	no						5a63	manual	4	12	real	map vs. model correlation coefficient,energy function	no		yes	yes	no
3	T0007EM123_2	Map B	GSec	emcm128_GSec	Optimized current	yes	yes	no	no	no	-100	5a63	fully automated	1	50	real	map vs. model correlation coefficient,map vs. model FSC curve,energy function,cross-validation procedure	yes	1.4	yes	yes	yes
4	T0007EM130_2	Map B	GSec	emcm138_GSec	ab-initio	yes	no	no	yes	no	-15		fully automated	0	34	real	map vs. model correlation coefficient	no		yes	yes	no
5	T0007EM130_4	Map B	GSec	emcm159_GSec	ab-initio	yes	no	no	yes	no	-15		fully automated	0	34	real	map vs. model correlation coefficient	no		yes	yes	no
6	T0007EM133_1	Map B	GSec	emcm168_GSec	Fitted another	yes	no	no	yes	no	0		partially automated, some manual steps	1	10	real	map vs. model correlation coefficient	no		yes	yes	no
7	T0007EM164_2	Map B	GSec	emcm105_GSec	Optimized current	no						5a63	fully automated	1	1	reciprocal	map vs. model correlation coefficient	no		yes	yes	no
8	T0007EM181_1	Map B	GSec	emcm144_GSec	ab-initio	yes	no	no	no	yes	0		fully automated	1	395	real	map vs. model correlation coefficient	no		yes	yes	no
9	T0007EM181_2	Map B	GSec	emcm148_GSec	ab-initio	yes	no	no	no	yes	0		fully automated	1	10	real	map vs. model correlation coefficient	no		no	yes	no
10	T0007EM183_1‑10	Map B	GSec	emcm112_GSec	ab-initio	yes	yes	no	yes	yes	0		fully automated	0	70	real	map vs. model correlation coefficient,energy function	no		no	yes	no
11	T0007EM185_1	Map B	GSec	emcm206_GSec	ab-initio	no							partially automated, some manual steps	6	40	real	map vs. model correlation coefficient,energy function	no		no	no	no
12	T0007EM192_2	Map B	GSec	emcm201_GSec	Optimized current	no						5a63	partially automated, some manual steps	1	1	real	map vs. model correlation coefficient,energy function,cross-validation procedure	no		yes	yes	no
13	T0007EM194_1	Map B	GSec	emcm196_GSec	ab-initio	yes	yes	no	no	no	0		fully automated	1	1	real	other	no		no	yes	no

EMDataResource
Sponsored by the US National Institute of General Medical Sciences (NIH/NIGMS)
Please address any questions or queries to:
© 2015-2021